Transcript: lnc-NABP1-3:1

Basic information

LNCipedia transcript ID: lnc-NABP1-3:1 
LNCipedia gene ID: lnc-NABP1-3
Location (hg38): chr2:191792789-191820250
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 764 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00003066; NONHSAT076134
Alternative gene names: XLOC_001789; linc-SLC39A10-9


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -180.9853 non-coding 
CPAT coding probability 46.47% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NABP1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-OBFC2A-3:1
3.1 lnc-OBFC2A-3:1
4.0 lnc-OBFC2A-3:1
4.1 lnc-OBFC2A-3:1
5.0 lnc-OBFC2A-3:1
5.1 lnc-FAM171B-41:1
5.2 lnc-NABP1-3:1