Transcript: lnc-MYOM1-2:6

Basic information

LNCipedia transcript ID: lnc-MYOM1-2:6 
LNCipedia gene ID: lnc-MYOM1-2
Location (hg38): chr18:3983130-4248697
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1550 bp
Exons: 5
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000515196
Alternative gene names: ENSG00000250093


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -147.025 non-coding 
CPAT coding probability 0.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MYOM1-2:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DLGAP1-2:1
3.1 lnc-DLGAP1-2:1
4.0 lnc-DLGAP1-2:1
4.1 lnc-DLGAP1-2:1
5.0 lnc-DLGAP1-2:1
5.1 lnc-SMAD2-347:2
5.2 lnc-MYOM1-2:6