Transcript: lnc-MYCT1-2:1

Basic information

LNCipedia transcript ID: lnc-MYCT1-2:1 
LNCipedia gene ID: lnc-MYCT1-2
Location (hg38): chr6:152545933-152546974
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 714 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000449282.1; RP11-133I21.2-001; OTTHUMT00000042744.1; NONHSAT115590
Alternative gene names: ENSG00000233464.1; RP11-133I21.2; OTTHUMG00000015847.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -111.3147 non-coding 
CPAT coding probability 1.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MYCT1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MYCT1-2:1
4.0 lnc-MYCT1-2:1
4.1 lnc-MYCT1-2:1
5.0 lnc-MYCT1-2:1
5.1 lnc-ESR1-4:2
5.2 lnc-MYCT1-2:1