Transcript: lnc-MYCN-6:3

Basic information

LNCipedia transcript ID: lnc-MYCN-6:3 
LNCipedia gene ID: lnc-MYCN-6
Ensembl Gene ID: ENSG00000237633
Ensembl Transcript ID: ENST00000443066
Location (hg38): chr2:16523190-16527809
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 445 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT147075; ENST00000443066.2
Alternative gene names: ENSG00000237633.2; AC104623.2; AC104623.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -83.0319 non-coding 
CPAT coding probability 1.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MYCN-6:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MYCN-6:3
4.0 lnc-MYCN-6:3
4.1 lnc-MYCN-6:3
5.0 lnc-MYCN-6:3
5.1 lnc-SNX17-129:3
5.2 lnc-MYCN-6:3