Transcript: lnc-MUC20-5:6

Basic information

LNCipedia transcript ID: lnc-MUC20-5:6 
LNCipedia gene ID: lnc-MUC20-5
Location (hg38): chr3:195647455-195649417
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1586 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00007074; NONHSAT094174
Alternative gene names: XLOC_002996; linc-MUC20-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 55.3328 non-coding 
CPAT coding probability 27.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MUC20-5:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC069257.9.1-3:3
3.1 lnc-AC069257.9.1-5:3
4.0 lnc-AC069257.9.1-5:3
4.1 lnc-AC069257.9.1-5:3
5.0 lnc-AC069257.9.1-5:3
5.1 lnc-MUC20-5:3
5.2 lnc-MUC20-5:6