Transcript: lnc-MUC15-5:1

Basic information

LNCipedia transcript ID: lnc-MUC15-5:1 
LNCipedia gene ID: lnc-MUC15-5
Location (hg38): chr11:26589360-26591961
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2602 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA262:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.0719 non-coding 
CPAT coding probability 0.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MUC15-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-MUC15-5:1
4.1 lnc-MUC15-5:1
5.0 lnc-MUC15-5:1
5.1 lnc-CSTF3-70:1
5.2 lnc-MUC15-5:1