Transcript: lnc-MTX3-2:1

Basic information

LNCipedia transcript ID: lnc-MTX3-2:1 
LNCipedia gene ID: lnc-MTX3-2
Location (hg38): chr5:80000670-80011885
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 783 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT102381
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -126.697 non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MTX3-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MTX3-2:1
4.0 lnc-MTX3-2:1
4.1 lnc-MTX3-2:1
5.0 lnc-MTX3-2:1
5.1 lnc-ANKRD34B-17:1
5.2 lnc-MTX3-2:1