Transcript: lnc-MTRNR2L1-83:4

Basic information

LNCipedia transcript ID: lnc-MTRNR2L1-83:4 
LNCipedia gene ID: lnc-MTRNR2L1-83
Ensembl Gene ID: ENSG00000276399
Ensembl Transcript ID: ENST00000612344
Location (hg38): chr17:22406019-22413744
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3801 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000612344.1
Alternative gene names: ENSG00000276399.1; FLJ36000; AC209154.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 55.07% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MTRNR2L1-83:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-PIPOX-83:4
5.1 lnc-PIPOX-83:4
5.2 lnc-MTRNR2L1-83:4