Transcript: lnc-MTRNR2L1-83:1

Basic information

LNCipedia transcript ID: lnc-MTRNR2L1-83:1 
LNCipedia gene ID: lnc-MTRNR2L1-83
Location (hg38): chr17:22399257-22413741
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3798 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT052239; NR_027084
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 112.8438 coding 
CPAT coding probability 69.54% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MTRNR2L1-83:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM27L-6:2
4.0 lnc-FAM27L-6:2
4.1 lnc-FAM27L-6:2
5.0 lnc-FAM27L-6:2
5.1 lnc-PIPOX-83:1
5.2 lnc-MTRNR2L1-83:1