Transcript: lnc-MTFR2-2:7

Basic information

LNCipedia transcript ID: lnc-MTFR2-2:7 
LNCipedia gene ID: lnc-MTFR2-2
Ensembl Gene ID: ENSG00000237596
Ensembl Transcript ID: ENST00000585946
Location (hg38): chr6:136095960-136191875
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 824 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT115112; ENST00000585946.1; ENST00000585946.5
Alternative gene names: ENSG00000237596.2; RP13-143G15.4; ENSG00000237596.6; AL138828.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 82.492 coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MTFR2-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM54A-1:4
4.0 lnc-FAM54A-2:9
4.1 lnc-FAM54A-2:9
5.0 lnc-FAM54A-2:9
5.1 lnc-OLIG3-38:7
5.2 lnc-MTFR2-2:7