Transcript: lnc-MTFR2-2:10

Basic information

LNCipedia transcript ID: lnc-MTFR2-2:10 
LNCipedia gene ID: lnc-MTFR2-2
Ensembl Gene ID: ENSG00000237596
Ensembl Transcript ID: ENST00000626816
Location (hg38): chr6:136046263-136094186
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 659 bp
Exons: 5
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000626816.2
Alternative gene names: ENSG00000237596.6; RP13-143G15.4; AL138828.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -84.2148 non-coding 
CPAT coding probability 1.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MTFR2-2:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-FAM54A-2:12
4.1 lnc-FAM54A-2:12
5.0 lnc-FAM54A-2:12
5.1 lnc-OLIG3-38:10
5.2 lnc-MTFR2-2:10