Transcript: lnc-MTFP1-4:3

Basic information

LNCipedia transcript ID: lnc-MTFP1-4:3 
LNCipedia gene ID: lnc-MTFP1-4
Ensembl Gene ID: ENSG00000273428
Ensembl Transcript ID: ENST00000366413
Location (hg38): chr22:30435544-30436244
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 696 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000366413.5
Alternative gene names: ENSG00000273428.3; RP4-539M6.22; AC004832.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -214.4655 non-coding 
CPAT coding probability 89.21% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MTFP1-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-MTFP1-4:3
4.1 lnc-MTFP1-4:3
5.0 lnc-MTFP1-4:3
5.1 lnc-OSBP2-4:3
5.2 lnc-MTFP1-4:3