Transcript: lnc-MS4A8-17:4

Basic information

LNCipedia transcript ID: lnc-MS4A8-17:4 
LNCipedia gene ID: lnc-MS4A8-17
Location (hg38): chr11:60615751-60687146
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 754 bp
Exons: 6
Sources: Broad Institute
Alternative transcript names: TCONS_00019095
Alternative gene names: XLOC_009142; linc-MS4A8B; MGC39681


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -136.1245 non-coding 
CPAT coding probability 4.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MS4A8-17:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MS4A8B-1:3
3.1 lnc-MS4A8B-1:4
4.0 LINC00301:4
4.1 LINC00301:4
5.0 LINC00301:4
5.1 lnc-MS4A8-1:4
5.2 lnc-MS4A8-17:4