Transcript: lnc-MS4A8-17:11

Basic information

LNCipedia transcript ID: lnc-MS4A8-17:11 
LNCipedia gene ID: lnc-MS4A8-17
Location (hg38): chr11:60653718-60687149
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 600 bp
Exons: 5
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT021584; FPKM1_group_4689_transcript_1
Alternative gene names: MGC39681


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.0829 non-coding 
CPAT coding probability 4.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MS4A8-17:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MS4A8B-1:12
4.0 LINC00301:11
4.1 LINC00301:11
5.0 LINC00301:11
5.1 lnc-MS4A8-1:11
5.2 lnc-MS4A8-17:11