Transcript: lnc-MRPS18C-6:1

Basic information

LNCipedia transcript ID: lnc-MRPS18C-6:1 
LNCipedia gene ID: lnc-MRPS18C-6
Location (hg38): chr4:83485287-83486095
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 809 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000069232.1|ENCT00000320920.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -93.0652 non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MRPS18C-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MRPS18C-6:1
5.0 lnc-MRPS18C-6:1
5.1 lnc-GPAT3-6:1
5.2 lnc-MRPS18C-6:1