Transcript: lnc-MRPS17-1:1

Basic information

LNCipedia transcript ID: lnc-MRPS17-1:1 
LNCipedia gene ID: lnc-MRPS17-1
Location (hg38): chr7:55973630-55993923
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 1698 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000500575
Alternative gene names: ENSG00000245903


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.553 non-coding 
CPAT coding probability 4.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MRPS17-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MRPS17-1:1
3.1 lnc-MRPS17-1:1
4.0 lnc-MRPS17-1:1
4.1 lnc-MRPS17-1:1
5.0 lnc-MRPS17-1:1
5.1 lnc-CCT6A-4:1
5.2 lnc-MRPS17-1:1