Transcript: lnc-MRPL39-2:2

Basic information

LNCipedia transcript ID: lnc-MRPL39-2:2 
LNCipedia gene ID: lnc-MRPL39-2
Location (hg38): chr21:25563430-25575168
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2046 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT081501
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 46.3462 non-coding 
CPAT coding probability 0.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MRPL39-2:2 no no no no

Available literature

  1. Iosue (2013), Argonaute 2 sustains the gene expression program driving human monocytic differentiation of acute myeloid leukemia cells., Cell Death Dis


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MRPL39-2:2
4.0 lnc-MRPL39-2:2
4.1 lnc-MRPL39-2:2
5.0 lnc-MRPL39-2:2
5.1 lnc-N6AMT1-23:1
5.2 lnc-MRPL39-2:2