Transcript: lnc-MRPL3-2:15

Basic information

LNCipedia transcript ID: lnc-MRPL3-2:15 
LNCipedia gene ID: lnc-MRPL3-2
Location (hg38): chr3:131359682-131360677
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 996 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT092141
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.0293 non-coding 
CPAT coding probability 4.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MRPL3-2:15 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MRPL3-4:1
4.0 lnc-MRPL3-4:1
4.1 lnc-MRPL3-2:15
5.0 lnc-MRPL3-2:15
5.1 lnc-H1FX-26:14
5.2 lnc-MRPL3-2:15