Transcript: lnc-MRPL19-1:2

Basic information

LNCipedia transcript ID: lnc-MRPL19-1:2 
LNCipedia gene ID: lnc-MRPL19-1
Ensembl Gene ID: ENSG00000231172
Ensembl Transcript ID: ENST00000451622
RefSeq ID: NR_110281
Location (hg38): chr2:75524068-75542706
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1185 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110281; ENST00000451622.2; NR_110281.1
Alternative gene names: ENSG00000231172.2; AC007099.1; LOC101927884


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.8084 non-coding 
CPAT coding probability 1.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MRPL19-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MRPL19-1:2
4.0 lnc-MRPL19-1:2
4.1 lnc-MRPL19-1:2
5.0 lnc-MRPL19-1:2
5.1 lnc-POLE4-27:1
5.2 lnc-MRPL19-1:2