Transcript: lnc-MPPE1-14:1

Basic information

LNCipedia transcript ID: lnc-MPPE1-14:1 
LNCipedia gene ID: lnc-MPPE1-14
Location (hg38): chr18:10784070-10785004
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 935 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc002kov_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -154.5772 non-coding 
CPAT coding probability 3.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MPPE1-14:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-677O4.1.1-6:1
4.0 lnc-RP11-677O4.1.1-6:1
4.1 lnc-RP11-677O4.1.1-6:1
5.0 lnc-RP11-677O4.1.1-6:1
5.1 lnc-SMAD2-290:1
5.2 lnc-MPPE1-14:1

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