Transcript: lnc-MPLKIP-5:3

Basic information

LNCipedia transcript ID: lnc-MPLKIP-5:3 
LNCipedia gene ID: lnc-MPLKIP-5
Location (hg38): chr7:39616621-39623527
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6089 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000095697.1|MICT00000322040.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -40.0495 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MPLKIP-5:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C7orf11-5:3
5.0 lnc-C7orf11-5:3
5.1 lnc-SFRP4-27:3
5.2 lnc-MPLKIP-5:3