Transcript: lnc-MOCS1-1:1

Basic information

LNCipedia transcript ID: lnc-MOCS1-1:1 
LNCipedia gene ID: lnc-MOCS1-1
Ensembl Gene ID: ENSG00000235033
Ensembl Transcript ID: ENST00000437947
Location (hg38): chr6:39897340-39900071
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 436 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000437947.1; RP11-61I13.2-001; OTTHUMT00000040461.1; NONHSAT112442
Alternative gene names: ENSG00000240126.1; RP11-61I13.2; OTTHUMG00000014651.1; ENSG00000235033.3; RP11-61I13.3; ENSG00000235033.7; AL590999.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -450.9376 non-coding 
CPAT coding probability 3.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MOCS1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MOCS1-1:1
4.0 lnc-MOCS1-1:1
4.1 lnc-MOCS1-1:1
5.0 lnc-MOCS1-1:1
5.1 lnc-TREML2-40:1
5.2 lnc-MOCS1-1:1