Transcript: lnc-MME-5:1

Basic information

LNCipedia transcript ID: lnc-MME-5:1 
LNCipedia gene ID: lnc-MME-5
Location (hg38): chr3:155245819-155246982
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 571 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_2506_chr3:154963607-154964771_breast
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.3331 non-coding 
CPAT coding probability 1.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MME-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MME-5:1
4.0 lnc-MME-5:1
4.1 lnc-MME-5:1
5.0 lnc-MME-5:1
5.1 lnc-LEKR1-18:1
5.2 lnc-MME-5:1