Transcript: lnc-MKLN1-18:1

Basic information

LNCipedia transcript ID: lnc-MKLN1-18:1 
LNCipedia gene ID: lnc-MKLN1-18
Location (hg38): chr7:132260861-132271269
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 744 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000445459.1; AC018643.4-001; OTTHUMT00000338727.1; NONHSAT123426
Alternative gene names: ENSG00000225144.1; AC018643.4; OTTHUMG00000155196.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -275.2934 non-coding 
CPAT coding probability 1.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MKLN1-18:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC009365.3.1-5:1
4.0 lnc-AC009365.3.1-5:1
4.1 lnc-AC009365.3.1-5:1
5.0 lnc-AC009365.3.1-5:1
5.1 lnc-CPA1-18:1
5.2 lnc-MKLN1-18:1