Transcript: lnc-MKL1-2:3

Basic information

LNCipedia transcript ID: lnc-MKL1-2:3 
LNCipedia gene ID: lnc-MKL1-2
Location (hg38): chr22:40680208-40684921
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4714 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000058689.1|FTMT28600001181.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 556.1181 coding 
CPAT coding probability 6.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MKL1-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MKL1-2:3
5.0 lnc-MKL1-2:3
5.1 lnc-DNAJB7-7:2
5.2 lnc-MKL1-2:3