Transcript: lnc-MIS18A-8:2

Basic information

LNCipedia transcript ID: lnc-MIS18A-8:2 
LNCipedia gene ID: lnc-MIS18A-8
Location (hg38): chr21:32033451-32036486
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1380 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_2194_chr21:33405763-33408799_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.9144 non-coding 
CPAT coding probability 2.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MIS18A-8:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MIS18A-8:2
4.0 lnc-MIS18A-8:2
4.1 lnc-MIS18A-8:2
5.0 lnc-MIS18A-8:2
5.1 lnc-TMEM50B-29:2
5.2 lnc-MIS18A-8:2