Transcript: lnc-MID1-1:9

Basic information

LNCipedia transcript ID: lnc-MID1-1:9 
LNCipedia gene ID: lnc-MID1-1
Ensembl Gene ID: ENSG00000234129
Ensembl Transcript ID: ENST00000608576
Location (hg38): chrX:10963371-11111138
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1080 bp
Exons: 5
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000608576.1; ENST00000608576.5
Alternative gene names: ENSG00000234129.3; RP11-120D5.1; ENSG00000234129.7; AC073529.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -55.7362 non-coding 
CPAT coding probability 0.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MID1-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARHGAP6-1:7
4.0 lnc-ARHGAP6-1:7
4.1 lnc-ARHGAP6-1:7
5.0 lnc-ARHGAP6-1:7
5.1 lnc-PCSK1N-219:8
5.2 lnc-MID1-1:9