Transcript: lnc-MID1-1:20

Basic information

LNCipedia transcript ID: lnc-MID1-1:20 
LNCipedia gene ID: lnc-MID1-1
Location (hg38): chrX:10963372-11106990
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 823 bp
Exons: 4
Sources: Broad Institute
Alternative transcript names: TCONS_00016945
Alternative gene names: XLOC_008111; linc-MID1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -55.7362 non-coding 
CPAT coding probability 0.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MID1-1:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ARHGAP6-1:4
3.1 lnc-ARHGAP6-1:4
4.0 lnc-ARHGAP6-1:4
4.1 lnc-ARHGAP6-1:4
5.0 lnc-ARHGAP6-1:4
5.1 lnc-PCSK1N-219:19
5.2 lnc-MID1-1:20