Transcript: lnc-MIA3-1:1

Basic information

LNCipedia transcript ID: lnc-MIA3-1:1 
LNCipedia gene ID: lnc-MIA3-1
Location (hg38): chr1:222644315-222682763
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 1302 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000433391.1; RP11-378J18.5-001; OTTHUMT00000091816.1; NONHSAT009691
Alternative gene names: ENSG00000244697.1; RP11-378J18.5; OTTHUMG00000037651.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -67.0988 non-coding 
CPAT coding probability 3.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MIA3-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MIA3-1:1
4.0 lnc-MIA3-1:1
4.1 lnc-MIA3-1:1
5.0 lnc-MIA3-1:1
5.1 lnc-CAPN2-32:1
5.2 lnc-MIA3-1:1