Transcript: lnc-MGMT-2:3

Basic information

LNCipedia transcript ID: lnc-MGMT-2:3 
LNCipedia gene ID: lnc-MGMT-2
Ensembl Gene ID: ENSG00000283141
Ensembl Transcript ID: ENST00000635764
Location (hg38): chr10:129784983-129806971
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1005 bp
Exons: 7
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000635764.1
Alternative gene names: ENSG00000283141.1; RP11-109A6.5; AL157832.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -91.2175 non-coding 
CPAT coding probability 11.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MGMT-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MGMT-2:3
5.0 lnc-MGMT-2:3
5.1 lnc-MGMT-2:3
5.2 lnc-MGMT-2:3