Transcript: lnc-MGAT1-3:11

Basic information

LNCipedia transcript ID: lnc-MGAT1-3:11 
LNCipedia gene ID: lnc-MGAT1-3
Location (hg38): chr5:180795430-180802767
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 534 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT105810
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -164.7755 non-coding 
CPAT coding probability 1.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MGAT1-3:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZFP62-3:11
4.0 lnc-MGAT1-3:11
4.1 lnc-MGAT1-3:11
5.0 lnc-MGAT1-3:11
5.1 lnc-OR2Y1-4:11
5.2 lnc-MGAT1-3:11