Transcript: lnc-MGAM2-4:1

Basic information

LNCipedia transcript ID: lnc-MGAM2-4:1 
LNCipedia gene ID: lnc-MGAM2-4
Location (hg38): chr7:142224198-142225736
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 509 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT123766; FPKM1_group_30521_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -64.5677 non-coding 
CPAT coding probability 6.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MGAM2-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-1220K2.2.1-4:1
4.0 lnc-RP11-1220K2.2.1-4:1
4.1 lnc-RP11-1220K2.2.1-4:1
5.0 lnc-RP11-1220K2.2.1-4:1
5.1 lnc-ADCK2-20:1
5.2 lnc-MGAM2-4:1