Transcript: lnc-MGAM2-22:1

Basic information

LNCipedia transcript ID: lnc-MGAM2-22:1 
LNCipedia gene ID: lnc-MGAM2-22
Ensembl Gene ID: ENSG00000241881
Ensembl Transcript ID: ENST00000486508
Location (hg38): chr7:142285750-142288869
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 384 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000486508.1
Alternative gene names: ENSG00000241881.1; U66059.58; AC245088.1; AC245088.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -4.3642 non-coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MGAM2-22:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-ADCK2-22:1
5.1 lnc-ADCK2-22:1
5.2 lnc-MGAM2-22:1