Transcript: lnc-METTL16-2:2

Basic information

LNCipedia transcript ID: lnc-METTL16-2:2 
LNCipedia gene ID: lnc-METTL16-2
Location (hg38): chr17:2389266-2392078
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2813 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000575402.1; RP1-59D14.6-001; OTTHUMT00000438874.1; NONHSAT144953
Alternative gene names: ENSG00000261903.1; RP1-59D14.6; OTTHUMG00000177762.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.6733 non-coding 
CPAT coding probability 8.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-METTL16-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC006435.1-2:1
4.0 lnc-AC006435.1-2:1
4.1 lnc-AC006435.1-2:1
5.0 lnc-AC006435.1-2:1
5.1 lnc-RPH3AL-67:1
5.2 lnc-METTL16-2:2