Transcript: lnc-METTL14-1:3

Basic information

LNCipedia transcript ID: lnc-METTL14-1:3 
LNCipedia gene ID: lnc-METTL14-1
Location (hg38): chr4:118883786-118884685
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 789 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008210; NONHSAT098026
Alternative gene names: XLOC_003666; linc-SYNPO2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -71.9223 non-coding 
CPAT coding probability 12.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-METTL14-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SYNPO2-1:1
3.1 lnc-SYNPO2-1:1
4.0 lnc-SYNPO2-1:1
4.1 lnc-SYNPO2-1:1
5.0 lnc-SYNPO2-1:1
5.1 lnc-EXOSC9-31:5
5.2 lnc-METTL14-1:3