Transcript: lnc-MED15-1:12

Basic information

LNCipedia transcript ID: lnc-MED15-1:12 
LNCipedia gene ID: lnc-MED15-1
Location (hg38): chr22:20498513-20500835
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 374 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00029521
Alternative gene names: XLOC_014159; linc-MED15


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.0112 non-coding 
CPAT coding probability 1.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MED15-1:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF74-1:10
3.1 lnc-ZNF74-1:10
4.0 lnc-MED15-1:12
4.1 lnc-MED15-1:12
5.0 lnc-MED15-1:12
5.1 lnc-SERPIND1-5:11
5.2 lnc-MED15-1:12