Transcript: lnc-MED1-4:1

Basic information

LNCipedia transcript ID: lnc-MED1-4:1 
LNCipedia gene ID: lnc-MED1-4
Location (hg38): chr17:39461466-39462630
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 670 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000033577.1|HBMT00000626425.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -285.2151 non-coding 
CPAT coding probability 18.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MED1-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MED1-4:1
5.0 lnc-MED1-4:1
5.1 lnc-MED24-21:1
5.2 lnc-MED1-4:1