Transcript: lnc-MDM2-3:2

Basic information

LNCipedia transcript ID: lnc-MDM2-3:2 
LNCipedia gene ID: lnc-MDM2-3
Location (hg38): chr12:69007631-69008444
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 814 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000009446.1|FTMT24800004002.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -298.3678 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MDM2-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MDM2-3:2
5.0 lnc-MDM2-3:2
5.1 lnc-SLC35E3-13:2
5.2 lnc-MDM2-3:2