Transcript: lnc-MDH1B-5:1

Basic information

LNCipedia transcript ID: lnc-MDH1B-5:1 
LNCipedia gene ID: lnc-MDH1B-5
Location (hg38): chr2:206787630-206787968
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 339 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr2_15720_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -117.9015 non-coding 
CPAT coding probability 1.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MDH1B-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MDH1B-5:1
4.0 lnc-MDH1B-5:1
4.1 lnc-MDH1B-5:1
5.0 lnc-MDH1B-5:1
5.1 lnc-FN1-44:1
5.2 lnc-MDH1B-5:1