Transcript: lnc-MDFIC2-2:4

Basic information

LNCipedia transcript ID: lnc-MDFIC2-2:4 
LNCipedia gene ID: lnc-MDFIC2-2
Location (hg38): chr3:70605447-70606110
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 352 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006532; NONHSAT090383
Alternative gene names: XLOC_003156; linc-FRMD4B-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -125.3013 non-coding 
CPAT coding probability 4.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MDFIC2-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FOXP1-1:3
3.1 lnc-FOXP1-1:3
4.0 lnc-FOXP1-1:3
4.1 lnc-FOXP1-1:3
5.0 lnc-FOXP1-1:3
5.1 lnc-FOXP1-9:4
5.2 lnc-MDFIC2-2:4