Transcript: lnc-MCTP2-1:1

Basic information

LNCipedia transcript ID: lnc-MCTP2-1:1 
LNCipedia gene ID: lnc-MCTP2-1
Location (hg38): chr15:94480811-94483952
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3142 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000565106.1; RP11-4F5.2-001; OTTHUMT00000435868.1; NONHSAT050160
Alternative gene names: ENSG00000260359.1; RP11-4F5.2; OTTHUMG00000177215.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.65 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MCTP2-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MCTP2-1:1
4.0 lnc-MCTP2-1:1
4.1 lnc-MCTP2-1:1
5.0 lnc-MCTP2-1:1
5.1 lnc-ARRDC4-62:1
5.2 lnc-MCTP2-1:1