Transcript: lnc-MC5R-1:16

Basic information

LNCipedia transcript ID: lnc-MC5R-1:16 
LNCipedia gene ID: lnc-MC5R-1
Location (hg38): chr18:14186936-14189150
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2215 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA631:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.5661 non-coding 
CPAT coding probability 6.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MC5R-1:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-MC5R-1:16
4.1 lnc-MC5R-1:16
5.0 lnc-MC5R-1:16
5.1 lnc-RIOK3-105:5
5.2 lnc-MC5R-1:16