Transcript: lnc-MB-3:1

Basic information

LNCipedia transcript ID: lnc-MB-3:1 
LNCipedia gene ID: lnc-MB-3
Location (hg38): chr22:35682130-35684778
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1964 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003arg_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -17.1655 non-coding 
CPAT coding probability 52.41% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MB-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MB-3:1
4.0 lnc-MB-3:1
4.1 lnc-MB-3:1
5.0 lnc-MB-3:1
5.1 lnc-APOL3-6:1
5.2 lnc-MB-3:1