Transcript: lnc-MAX-2:3

Basic information

LNCipedia transcript ID: lnc-MAX-2:3 
LNCipedia gene ID: lnc-MAX-2
Ensembl Gene ID: ENSG00000258760
Ensembl Transcript ID: ENST00000553754
Location (hg38): chr14:65253701-65318790
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 574 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000553754.1; CTD-2509G16.5-001; OTTHUMT00000412041.1; NONHSAT037380
Alternative gene names: ENSG00000258760.1; CTD-2509G16.5; OTTHUMG00000171168.1; AL355076.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -135.2648 non-coding 
CPAT coding probability 10.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAX-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAX-3:1
4.0 lnc-MAX-3:1
4.1 lnc-MAX-2:3
5.0 lnc-MAX-2:3
5.1 lnc-DHRS7-58:1
5.2 lnc-MAX-2:3