Transcript: lnc-MAST4-5:11

Basic information

LNCipedia transcript ID: lnc-MAST4-5:11 
LNCipedia gene ID: lnc-MAST4-5
Location (hg38): chr5:67793163-67805238
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 723 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000249364.1|ENST00000515227.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -157.9832 non-coding 
CPAT coding probability 2.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAST4-5:11 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MAST4-5:11
5.0 lnc-MAST4-5:11
5.1 lnc-NLN-35:8
5.2 lnc-MAST4-5:11