Transcript: lnc-MARCH7-1:3

Basic information

LNCipedia transcript ID: lnc-MARCH7-1:3 
LNCipedia gene ID: lnc-MARCH7-1
RefSeq ID: NR_110588
Location (hg38): chr2:159615294-159618042
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2453 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110588; NR_110588.1
Alternative gene names: LOC643072


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 27.6127 non-coding 
CPAT coding probability 8.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MARCH7-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MARCH7-1:3
4.0 lnc-MARCH7-1:3
4.1 lnc-MARCH7-1:3
5.0 lnc-MARCH7-1:3
5.1 lnc-TANC1-11:2
5.2 lnc-MARCH7-1:3