Transcript: lnc-MAPK6-18:1

Basic information

LNCipedia transcript ID: lnc-MAPK6-18:1 
LNCipedia gene ID: lnc-MAPK6-18
Location (hg38): chr15:52844043-52879414
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 428 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_1157_chr15:53136239-53171611_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -99.2891 non-coding 
CPAT coding probability 1.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAPK6-18:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAPK6-18:1
4.0 lnc-MAPK6-18:1
4.1 lnc-MAPK6-18:1
5.0 lnc-MAPK6-18:1
5.1 lnc-CCNDBP1-132:1
5.2 lnc-MAPK6-18:1