Transcript: lnc-MAP6-2:3

Basic information

LNCipedia transcript ID: lnc-MAP6-2:3 
LNCipedia gene ID: lnc-MAP6-2
Location (hg38): chr11:75758471-75759416
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 271 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019708; NONHSAT023126
Alternative gene names: XLOC_009505; linc-MAP6-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -120.3823 non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAP6-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MAP6-1:3
3.1 lnc-MAP6-2:3
4.0 lnc-MAP6-2:3
4.1 lnc-MAP6-2:3
5.0 lnc-MAP6-2:3
5.1 lnc-WNT11-10:4
5.2 lnc-MAP6-2:3