Transcript: lnc-MAP4K1-2:1

Basic information

LNCipedia transcript ID: lnc-MAP4K1-2:1 
LNCipedia gene ID: lnc-MAP4K1-2
Ensembl Gene ID: ENSG00000269445
Ensembl Transcript ID: ENST00000597015
Location (hg38): chr19:38526954-38528555
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 570 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT066222; ENST00000597015.1
Alternative gene names: ENSG00000269445.1; AC067969.1; AC067969.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -241.9115 non-coding 
CPAT coding probability 39.37% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MAP4K1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAP4K1-2:1
4.0 lnc-MAP4K1-2:1
4.1 lnc-MAP4K1-2:1
5.0 lnc-MAP4K1-2:1
5.1 lnc-DPF1-10:1
5.2 lnc-MAP4K1-2:1