Transcript: lnc-MAP3K9-10:2

Basic information

LNCipedia transcript ID: lnc-MAP3K9-10:2 
LNCipedia gene ID: lnc-MAP3K9-10
Location (hg38): chr14:71107425-71143260
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 35669 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000269927.1|ENCT00000135426.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 179.009 coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MAP3K9-10:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MAP3K9-10:2
5.0 lnc-MAP3K9-10:2
5.1 lnc-ABCD4-44:1
5.2 lnc-MAP3K9-10:2